Currently, to integrate QnAMaker, you need to have an Action in the Fallback topic that users Power Automate to query one or more knowledgebases (not a trivial task to get the best result from multiple knowledgebases) and return the result. You should be able to add a Knowledgebase as a type of Topic and then when the agent chooses which topic to implement this should be on a par with returning a Knowledgebase item where it uses the "Score" attribute (I presume Topics have scores too?) to decide what item to return.